STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araNPutative arabinose-binding protein precursor. (449 aa)    
Predicted Functional Partners:
araQ1
L-arabinose transport system permease protein AraQ.
 0.981
araP
L-arabinose transport system permease protein AraP.
 
 0.974
lacF
Lactose transport system permease protein LacF.
 
 0.952
sugB1
Trehalose transport system permease protein SugB.
  
 0.941
sugB2
Trehalose transport system permease protein SugB.
  
 0.941
sugA1
Trehalose transport system permease protein SugA.
  
 0.938
sugA2
Trehalose transport system permease protein SugA.
  
 0.938
araQ2
L-arabinose transport system permease protein AraQ.
 
 0.877
bgaB
Beta-galactosidase bgaB.
 
   
 0.870
sugC1
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
  
 0.831
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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