STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXFE_03930Hypothetical protein. (382 aa)    
Predicted Functional Partners:
AXFE_03950
Thiamine transporter membrane protein.
 
  0.986
AXFE_03940
Spermidine/putrescine ABC transporter membrane protein.
 
 
  0.983
cysA1
Sulfate/thiosulfate import ATP-binding protein CysA; Belongs to the ABC transporter superfamily.
 
 
 0.968
cysA2
Sulfate/thiosulfate import ATP-binding protein CysA.
  
 
 0.846
sugC4
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
  
 
 0.820
potA
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
  
 
 0.820
AXFE_30810
Spermidine/putrescine ABC transporter membrane protein.
 
 
 0.734
AXFE_32390
Spermidine/putrescine ABC transporter membrane protein.
 
 
 0.724
efeU
Ferrous iron permease EfeU.
  
    0.633
AXFE_00220
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.541
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.