STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysA1Sulfate/thiosulfate import ATP-binding protein CysA; Belongs to the ABC transporter superfamily. (364 aa)    
Predicted Functional Partners:
AXFE_03950
Thiamine transporter membrane protein.
 
 
 0.988
AXFE_03940
Spermidine/putrescine ABC transporter membrane protein.
 
 
  0.973
AXFE_03930
Hypothetical protein.
 
 
 0.968
macB2
Macrolide export ATP-binding/permease protein MacB.
 
 
    0.896
AXFE_32400
Bacterial extracellular solute-binding protein.
 
 
 0.867
phnS
Putative 2-aminoethylphosphonate-binding periplasmic protein precursor.
  
 
 0.849
AXFE_32390
Spermidine/putrescine ABC transporter membrane protein.
 
 0.814
AXFE_30810
Spermidine/putrescine ABC transporter membrane protein.
 
 
 0.800
oppC
Oligopeptide transport system permease protein OppC.
 
 
    0.690
dppC2
Dipeptide transport system permease protein DppC.
 
 
    0.671
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.