Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AXFE_04230 | mscK | AXFE_04230 | AXFE_04220 | Hypothetical protein. | Mechanosensitive channel MscK precursor. | 0.449 |
AXFE_22950 | mscK | AXFE_22950 | AXFE_04220 | Trehalase. | Mechanosensitive channel MscK precursor. | 0.447 |
AXFE_22950 | otsA | AXFE_22950 | AXFE_10810 | Trehalase. | Trehalose-phosphate synthase. | 0.968 |
mscK | AXFE_04230 | AXFE_04220 | AXFE_04230 | Mechanosensitive channel MscK precursor. | Hypothetical protein. | 0.449 |
mscK | AXFE_22950 | AXFE_04220 | AXFE_22950 | Mechanosensitive channel MscK precursor. | Trehalase. | 0.447 |
mscK | otsA | AXFE_04220 | AXFE_10810 | Mechanosensitive channel MscK precursor. | Trehalose-phosphate synthase. | 0.564 |
mscK | purF | AXFE_04220 | AXFE_11870 | Mechanosensitive channel MscK precursor. | Amidophosphoribosyltransferase precursor; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.467 |
mscK | rng | AXFE_04220 | AXFE_02690 | Mechanosensitive channel MscK precursor. | Ribonuclease G. | 0.592 |
otsA | AXFE_22950 | AXFE_10810 | AXFE_22950 | Trehalose-phosphate synthase. | Trehalase. | 0.968 |
otsA | mscK | AXFE_10810 | AXFE_04220 | Trehalose-phosphate synthase. | Mechanosensitive channel MscK precursor. | 0.564 |
purF | mscK | AXFE_11870 | AXFE_04220 | Amidophosphoribosyltransferase precursor; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | Mechanosensitive channel MscK precursor. | 0.467 |
rng | mscK | AXFE_02690 | AXFE_04220 | Ribonuclease G. | Mechanosensitive channel MscK precursor. | 0.592 |