Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AXFE_01540 | AXFE_06330 | AXFE_01540 | AXFE_06330 | Transposase. | Transposase. | 0.711 |
AXFE_01540 | AXFE_16790 | AXFE_01540 | AXFE_16790 | Transposase. | Hypothetical protein. | 0.484 |
AXFE_01540 | AXFE_29120 | AXFE_01540 | AXFE_29120 | Transposase. | Hypothetical protein. | 0.476 |
AXFE_06330 | AXFE_01540 | AXFE_06330 | AXFE_01540 | Transposase. | Transposase. | 0.711 |
AXFE_06330 | AXFE_15040 | AXFE_06330 | AXFE_15040 | Transposase. | Transposase. | 0.714 |
AXFE_06330 | AXFE_16790 | AXFE_06330 | AXFE_16790 | Transposase. | Hypothetical protein. | 0.805 |
AXFE_06330 | AXFE_16850 | AXFE_06330 | AXFE_16850 | Transposase. | Transposase. | 0.605 |
AXFE_06330 | AXFE_16970 | AXFE_06330 | AXFE_16970 | Transposase. | Hypothetical protein. | 0.412 |
AXFE_06330 | AXFE_27350 | AXFE_06330 | AXFE_27350 | Transposase. | Hypothetical protein. | 0.798 |
AXFE_06330 | AXFE_29120 | AXFE_06330 | AXFE_29120 | Transposase. | Hypothetical protein. | 0.780 |
AXFE_06330 | AXFE_33470 | AXFE_06330 | AXFE_33470 | Transposase. | TraM recognition site of TraD and TraG. | 0.421 |
AXFE_06330 | AXFE_33490 | AXFE_06330 | AXFE_33490 | Transposase. | Hypothetical protein. | 0.556 |
AXFE_06330 | traI | AXFE_06330 | AXFE_16920 | Transposase. | Multifunctional conjugation protein TraI. | 0.458 |
AXFE_15040 | AXFE_06330 | AXFE_15040 | AXFE_06330 | Transposase. | Transposase. | 0.714 |
AXFE_15040 | AXFE_16790 | AXFE_15040 | AXFE_16790 | Transposase. | Hypothetical protein. | 0.501 |
AXFE_15040 | AXFE_29120 | AXFE_15040 | AXFE_29120 | Transposase. | Hypothetical protein. | 0.493 |
AXFE_16790 | AXFE_01540 | AXFE_16790 | AXFE_01540 | Hypothetical protein. | Transposase. | 0.484 |
AXFE_16790 | AXFE_06330 | AXFE_16790 | AXFE_06330 | Hypothetical protein. | Transposase. | 0.805 |
AXFE_16790 | AXFE_15040 | AXFE_16790 | AXFE_15040 | Hypothetical protein. | Transposase. | 0.501 |
AXFE_16790 | AXFE_16970 | AXFE_16790 | AXFE_16970 | Hypothetical protein. | Hypothetical protein. | 0.474 |
page 1 of 3