Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AXFE_06560 | AXFE_06570 | AXFE_06560 | AXFE_06570 | Hypothetical protein. | AIR carboxylase. | 0.980 |
AXFE_06560 | AXFE_20140 | AXFE_06560 | AXFE_20140 | Hypothetical protein. | Hypothetical protein. | 0.625 |
AXFE_06560 | AXFE_32670 | AXFE_06560 | AXFE_32670 | Hypothetical protein. | Hypothetical protein. | 0.753 |
AXFE_06560 | fdh | AXFE_06560 | AXFE_02960 | Hypothetical protein. | D-threo-aldose 1-dehydrogenase. | 0.492 |
AXFE_06560 | gpr1 | AXFE_06560 | AXFE_06550 | Hypothetical protein. | L-glyceraldehyde 3-phosphate reductase. | 0.635 |
AXFE_06560 | guaA | AXFE_06560 | AXFE_28990 | Hypothetical protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.508 |
AXFE_06560 | nadE2 | AXFE_06560 | AXFE_10890 | Hypothetical protein. | NH(3)-dependent NAD(+) synthetase. | 0.970 |
AXFE_06560 | pncC | AXFE_06560 | AXFE_00350 | Hypothetical protein. | Nicotinamide-nucleotide amidohydrolase PncC; Belongs to the CinA family. | 0.518 |
AXFE_06560 | pyrG | AXFE_06560 | AXFE_22400 | Hypothetical protein. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.557 |
AXFE_06570 | AXFE_06560 | AXFE_06570 | AXFE_06560 | AIR carboxylase. | Hypothetical protein. | 0.980 |
AXFE_06570 | AXFE_20140 | AXFE_06570 | AXFE_20140 | AIR carboxylase. | Hypothetical protein. | 0.733 |
AXFE_06570 | AXFE_32670 | AXFE_06570 | AXFE_32670 | AIR carboxylase. | Hypothetical protein. | 0.822 |
AXFE_06570 | fdh | AXFE_06570 | AXFE_02960 | AIR carboxylase. | D-threo-aldose 1-dehydrogenase. | 0.477 |
AXFE_06570 | gpr1 | AXFE_06570 | AXFE_06550 | AIR carboxylase. | L-glyceraldehyde 3-phosphate reductase. | 0.629 |
AXFE_06570 | guaA | AXFE_06570 | AXFE_28990 | AIR carboxylase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.526 |
AXFE_06570 | nadE2 | AXFE_06570 | AXFE_10890 | AIR carboxylase. | NH(3)-dependent NAD(+) synthetase. | 0.983 |
AXFE_06570 | pncC | AXFE_06570 | AXFE_00350 | AIR carboxylase. | Nicotinamide-nucleotide amidohydrolase PncC; Belongs to the CinA family. | 0.508 |
AXFE_20140 | AXFE_06560 | AXFE_20140 | AXFE_06560 | Hypothetical protein. | Hypothetical protein. | 0.625 |
AXFE_20140 | AXFE_06570 | AXFE_20140 | AXFE_06570 | Hypothetical protein. | AIR carboxylase. | 0.733 |
AXFE_20140 | nadE2 | AXFE_20140 | AXFE_10890 | Hypothetical protein. | NH(3)-dependent NAD(+) synthetase. | 0.735 |
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