STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXFE_07350UDP-glucose 4-epimerase. (326 aa)    
Predicted Functional Partners:
galK
Galactokinase; Belongs to the GHMP kinase family.
 
 0.954
galT
Galactose-1-phosphate uridylyltransferase.
 
 0.948
tuaD
UDP-glucose 6-dehydrogenase TuaD.
 
 0.918
rfbB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
0.890
hddC1
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
 
 
 0.859
AXFE_28380
UDP-glucose 4-epimerase.
 
 
 0.852
gtaB
UTP--glucose-1-phosphate uridylyltransferase.
  
 0.834
ywqF
UDP-glucose 6-dehydrogenase YwqF.
 
 0.833
AXFE_24160
UDP-glucose 4-epimerase.
 
 
0.828
AXFE_07170
Hypothetical protein.
  
 0.812
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.