STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXFE_09240Hypothetical protein. (264 aa)    
Predicted Functional Partners:
AXFE_09250
Hypothetical protein.
       0.536
AXFE_09260
Hypothetical protein.
       0.536
AXFE_09180
Hypothetical protein; RecF/RecN/SMC N terminal domain.
       0.458
AXFE_09190
Hypothetical protein.
       0.458
AXFE_09200
Chromosome segregation protein.
       0.458
hsdR1
Type-1 restriction enzyme R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.458
AXFE_09220
Putative type-1 restriction enzyme specificity protein MG438.
       0.458
AXFE_09230
Putative type I restriction enzymeP M protein.
       0.458
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.