STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgsA1-2CDP-diacylglycerol--inositol 3-phosphatidyltransferase. (256 aa)    
Predicted Functional Partners:
pncC
Nicotinamide-nucleotide amidohydrolase PncC; Belongs to the CinA family.
  
  
 0.892
pgsA2
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.876
pgsA1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.875
cdsA
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.845
AXFE_09820
Phosphatidylinositol mannoside acyltransferase.
 
  
 0.823
ino1
Inositol-3-phosphate synthase.
 
  
 0.811
catD2
3-oxoadipate enol-lactonase 2.
    
  0.761
pimA
GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase.
 
 0.756
AXFE_13400
Hypothetical protein.
  
    0.556
AXFE_16040
Anaerobic benzoate catabolism transcriptional regulator.
  
    0.556
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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