STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sugB1Trehalose transport system permease protein SugB. (281 aa)    
Predicted Functional Partners:
AXFE_10170
Putative ABC transporter-binding protein precursor.
 
 0.999
sugA1
Trehalose transport system permease protein SugA.
 0.999
sugA2
Trehalose transport system permease protein SugA.
 0.996
sugC2
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 0.988
lacF
Lactose transport system permease protein LacF.
 0.985
AXFE_23260
Putative ABC transporter-binding protein precursor.
 
 0.985
sugC1
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 0.981
sugC3
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 0.981
malK
Maltose/maltodextrin import ATP-binding protein MalK; Belongs to the ABC transporter superfamily.
 0.979
araP
L-arabinose transport system permease protein AraP.
 0.953
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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