Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AXFE_24200 | bfmBAA | AXFE_24200 | AXFE_11930 | Glucose 1-dehydrogenase. | 2-oxoisovalerate dehydrogenase subunit alpha. | 0.801 |
AXFE_24200 | bglF | AXFE_24200 | AXFE_31230 | Glucose 1-dehydrogenase. | PTS system beta-glucoside-specific EIIBCA component. | 0.795 |
AXFE_24200 | fabF | AXFE_24200 | AXFE_20700 | Glucose 1-dehydrogenase. | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.885 |
AXFE_24200 | fabG3 | AXFE_24200 | AXFE_10270 | Glucose 1-dehydrogenase. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.770 |
AXFE_24200 | fabZ | AXFE_24200 | AXFE_21430 | Glucose 1-dehydrogenase. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ. | 0.822 |
AXFE_24200 | gltB2 | AXFE_24200 | AXFE_29190 | Glucose 1-dehydrogenase. | Glutamate synthase [NADPH] large chain. | 0.841 |
AXFE_24200 | metH | AXFE_24200 | AXFE_07620 | Glucose 1-dehydrogenase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.751 |
AXFE_24200 | pksC | AXFE_24200 | AXFE_20740 | Glucose 1-dehydrogenase. | Polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase PksC. | 0.882 |
amdA | fabG3 | AXFE_10290 | AXFE_10270 | Acetamidase. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.771 |
amdA | gltB2 | AXFE_10290 | AXFE_29190 | Acetamidase. | Glutamate synthase [NADPH] large chain. | 0.819 |
amdA | lldD | AXFE_10290 | AXFE_10280 | Acetamidase. | L-lactate dehydrogenase; Cytochrome. | 0.697 |
bfmBAA | AXFE_24200 | AXFE_11930 | AXFE_24200 | 2-oxoisovalerate dehydrogenase subunit alpha. | Glucose 1-dehydrogenase. | 0.801 |
bfmBAA | bglF | AXFE_11930 | AXFE_31230 | 2-oxoisovalerate dehydrogenase subunit alpha. | PTS system beta-glucoside-specific EIIBCA component. | 0.884 |
bfmBAA | fabF | AXFE_11930 | AXFE_20700 | 2-oxoisovalerate dehydrogenase subunit alpha. | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.466 |
bfmBAA | fabG3 | AXFE_11930 | AXFE_10270 | 2-oxoisovalerate dehydrogenase subunit alpha. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.801 |
bfmBAA | fabZ | AXFE_11930 | AXFE_21430 | 2-oxoisovalerate dehydrogenase subunit alpha. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ. | 0.490 |
bfmBAA | gltB2 | AXFE_11930 | AXFE_29190 | 2-oxoisovalerate dehydrogenase subunit alpha. | Glutamate synthase [NADPH] large chain. | 0.537 |
bfmBAA | lldD | AXFE_11930 | AXFE_10280 | 2-oxoisovalerate dehydrogenase subunit alpha. | L-lactate dehydrogenase; Cytochrome. | 0.770 |
bfmBAA | pksC | AXFE_11930 | AXFE_20740 | 2-oxoisovalerate dehydrogenase subunit alpha. | Polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase PksC. | 0.614 |
bglF | AXFE_24200 | AXFE_31230 | AXFE_24200 | PTS system beta-glucoside-specific EIIBCA component. | Glucose 1-dehydrogenase. | 0.795 |
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