Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aioB | atpB | AXFE_11130 | AXFE_18880 | Arsenite oxidase subunit AioB precursor. | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.588 |
aioB | ctaA1 | AXFE_11130 | AXFE_02910 | Arsenite oxidase subunit AioB precursor. | Heme A synthase. | 0.582 |
aioB | ctaC1 | AXFE_11130 | AXFE_11150 | Arsenite oxidase subunit AioB precursor. | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.996 |
aioB | ctaC2 | AXFE_11130 | AXFE_23650 | Arsenite oxidase subunit AioB precursor. | Cytochrome c oxidase subunit 2 precursor. | 0.952 |
aioB | ctaD1 | AXFE_11130 | AXFE_11160 | Arsenite oxidase subunit AioB precursor. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.997 |
aioB | ctaD2 | AXFE_11130 | AXFE_23660 | Arsenite oxidase subunit AioB precursor. | Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.958 |
aioB | ctaE | AXFE_11130 | AXFE_11110 | Arsenite oxidase subunit AioB precursor. | Cytochrome c oxidase subunit 3. | 0.999 |
aioB | ctaF | AXFE_11130 | AXFE_11170 | Arsenite oxidase subunit AioB precursor. | Cytochrome c oxidase polypeptide 4. | 0.996 |
aioB | nuoM1 | AXFE_11130 | AXFE_05640 | Arsenite oxidase subunit AioB precursor. | NADH-quinone oxidoreductase subunit M. | 0.956 |
aioB | petB | AXFE_11130 | AXFE_11140 | Arsenite oxidase subunit AioB precursor. | Cytochrome b6. | 0.999 |
atpB | aioB | AXFE_18880 | AXFE_11130 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Arsenite oxidase subunit AioB precursor. | 0.588 |
atpB | ctaC1 | AXFE_18880 | AXFE_11150 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.876 |
atpB | ctaC2 | AXFE_18880 | AXFE_23650 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Cytochrome c oxidase subunit 2 precursor. | 0.847 |
atpB | ctaD1 | AXFE_18880 | AXFE_11160 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.882 |
atpB | ctaD2 | AXFE_18880 | AXFE_23660 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.885 |
atpB | ctaE | AXFE_18880 | AXFE_11110 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Cytochrome c oxidase subunit 3. | 0.998 |
atpB | nuoM1 | AXFE_18880 | AXFE_05640 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | NADH-quinone oxidoreductase subunit M. | 0.963 |
atpB | petB | AXFE_18880 | AXFE_11140 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Cytochrome b6. | 0.817 |
ctaA1 | aioB | AXFE_02910 | AXFE_11130 | Heme A synthase. | Arsenite oxidase subunit AioB precursor. | 0.582 |
ctaA1 | ctaC1 | AXFE_02910 | AXFE_11150 | Heme A synthase. | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.985 |
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