Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AXFE_13120 | moeZ | AXFE_13120 | AXFE_07560 | Putative metallo-hydrolase. | Putative adenylyltransferase/sulfurtransferase MoeZ. | 0.888 |
AXFE_13120 | ydjA | AXFE_13120 | AXFE_13130 | Putative metallo-hydrolase. | Putative NAD(P)H nitroreductase YdjA. | 0.517 |
AXFE_25280 | cysG2 | AXFE_25280 | AXFE_29580 | NADH oxidase. | Siroheme synthase. | 0.656 |
AXFE_25280 | gltB2 | AXFE_25280 | AXFE_29190 | NADH oxidase. | Glutamate synthase [NADPH] large chain. | 0.946 |
AXFE_25280 | moeZ | AXFE_25280 | AXFE_07560 | NADH oxidase. | Putative adenylyltransferase/sulfurtransferase MoeZ. | 0.830 |
AXFE_25280 | ydjA | AXFE_25280 | AXFE_13130 | NADH oxidase. | Putative NAD(P)H nitroreductase YdjA. | 0.503 |
cysG2 | AXFE_25280 | AXFE_29580 | AXFE_25280 | Siroheme synthase. | NADH oxidase. | 0.656 |
cysG2 | gltB2 | AXFE_29580 | AXFE_29190 | Siroheme synthase. | Glutamate synthase [NADPH] large chain. | 0.543 |
cysG2 | moeZ | AXFE_29580 | AXFE_07560 | Siroheme synthase. | Putative adenylyltransferase/sulfurtransferase MoeZ. | 0.749 |
cysG2 | nasF | AXFE_29580 | AXFE_29610 | Siroheme synthase. | uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.987 |
cysG2 | ndx1 | AXFE_29580 | AXFE_07070 | Siroheme synthase. | Diadenosine hexaphosphate hydrolase; Belongs to the Nudix hydrolase family. | 0.464 |
cysG2 | ydjA | AXFE_29580 | AXFE_13130 | Siroheme synthase. | Putative NAD(P)H nitroreductase YdjA. | 0.808 |
drrB | ydjA | AXFE_03320 | AXFE_13130 | Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB. | Putative NAD(P)H nitroreductase YdjA. | 0.456 |
gltB2 | AXFE_25280 | AXFE_29190 | AXFE_25280 | Glutamate synthase [NADPH] large chain. | NADH oxidase. | 0.946 |
gltB2 | cysG2 | AXFE_29190 | AXFE_29580 | Glutamate synthase [NADPH] large chain. | Siroheme synthase. | 0.543 |
gltB2 | moeZ | AXFE_29190 | AXFE_07560 | Glutamate synthase [NADPH] large chain. | Putative adenylyltransferase/sulfurtransferase MoeZ. | 0.741 |
gltB2 | nasF | AXFE_29190 | AXFE_29610 | Glutamate synthase [NADPH] large chain. | uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.599 |
gltB2 | ndx1 | AXFE_29190 | AXFE_07070 | Glutamate synthase [NADPH] large chain. | Diadenosine hexaphosphate hydrolase; Belongs to the Nudix hydrolase family. | 0.630 |
gltB2 | ydjA | AXFE_29190 | AXFE_13130 | Glutamate synthase [NADPH] large chain. | Putative NAD(P)H nitroreductase YdjA. | 0.490 |
moeZ | AXFE_13120 | AXFE_07560 | AXFE_13120 | Putative adenylyltransferase/sulfurtransferase MoeZ. | Putative metallo-hydrolase. | 0.888 |
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