STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXFE_13670Putative enoyl-CoA hydratase 1. (151 aa)    
Predicted Functional Partners:
cfiB2
2-oxoglutarate carboxylase small subunit.
 
 
 0.818
mas
Mycocerosic acid synthase.
 
 
  0.789
AXFE_13660
Hypothetical protein.
       0.773
AXFE_13690
Hypothetical protein.
  
   0.710
AXFE_13680
Polyphosphate kinase 2 (PPK2).
       0.683
acrC
acryloyl-CoA reductase (NADH).
  
 0.519
paaG2
1,2-epoxyphenylacetyl-CoA isomerase.
 
 
  0.512
echA82
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
  0.488
AXFE_22250
Hypothetical protein.
 
  
  0.444
AXFE_27070
2,3-dimethylmalate lyase.
  
 
 0.439
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.