STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXFE_13790Hypothetical protein. (289 aa)    
Predicted Functional Partners:
AXFE_34280
Putative glycosyl hydrolase.
    
 0.771
ugtP
Processive diacylglycerol beta-glucosyltransferase.
 
  
  0.729
hddC2
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
 
 0.725
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.723
uvrD2
ATP-dependent DNA helicase UvrD2.
    
 
 0.713
pbpG1
D-alanyl-D-alanine endopeptidase precursor; Belongs to the peptidase S11 family.
  
     0.553
AXFE_13010
Putative multidrug export ATP-binding/permease protein.
  
  0.547
malP
Maltodextrin phosphorylase.
  
 0.519
rutD2
Putative aminoacrylate hydrolase RutD.
  
 
  0.504
AXFE_08880
Putative monoacyl phosphatidylinositol tetramannoside-binding protein LpqW precursor.
  
     0.502
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.