Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AXFE_02980 | AXFE_14410 | AXFE_02980 | AXFE_14410 | Pyridine nucleotide-disulfide oxidoreductase. | CHAD domain protein. | 0.613 |
AXFE_14410 | AXFE_02980 | AXFE_14410 | AXFE_02980 | CHAD domain protein. | Pyridine nucleotide-disulfide oxidoreductase. | 0.613 |
AXFE_14410 | hypF | AXFE_14410 | AXFE_04900 | CHAD domain protein. | Carbamoyltransferase HypF. | 0.452 |
AXFE_14410 | ribBA | AXFE_14410 | AXFE_25670 | CHAD domain protein. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.818 |
AXFE_14410 | soj1 | AXFE_14410 | AXFE_14420 | CHAD domain protein. | Sporulation initiation inhibitor protein Soj. | 0.612 |
hypF | AXFE_14410 | AXFE_04900 | AXFE_14410 | Carbamoyltransferase HypF. | CHAD domain protein. | 0.452 |
ribBA | AXFE_14410 | AXFE_25670 | AXFE_14410 | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | CHAD domain protein. | 0.818 |
ribBA | soj1 | AXFE_25670 | AXFE_14420 | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | Sporulation initiation inhibitor protein Soj. | 0.456 |
soj1 | AXFE_14410 | AXFE_14420 | AXFE_14410 | Sporulation initiation inhibitor protein Soj. | CHAD domain protein. | 0.612 |
soj1 | ribBA | AXFE_14420 | AXFE_25670 | Sporulation initiation inhibitor protein Soj. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.456 |