STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mshB1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase. (257 aa)    
Predicted Functional Partners:
mshD
Mycothiol acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
  
   
 0.763
AXFE_31750
DSBA-like thioredoxin domain protein.
  
     0.725
AXFE_02520
DSBA-like thioredoxin domain protein.
  
     0.723
AXFE_01580
DSBA-like thioredoxin domain protein.
  
     0.721
AXFE_16560
Hypothetical protein.
  
     0.709
AXFE_16570
Phosphatidylinositol 3- and 4-kinase.
  
     0.708
mca2
Mycothiol S-conjugate amidase.
  
     0.681
mshA4
D-inositol 3-phosphate glycosyltransferase.
  
 
 0.582
AXFE_22140
Bacterial membrane flanked domain protein.
  
     0.532
mshC
L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase.
  
  
 0.528
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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