STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXFE_15500Putative ABC transporter ATP-binding protein. (590 aa)    
Predicted Functional Partners:
pimC2
GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase.
 
  0.835
murG2
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase.
       0.778
AXFE_15540
UDP-glucose 4-epimerase.
 
    0.778
AXFE_15520
Hypothetical protein.
       0.773
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.642
moeZ
Putative adenylyltransferase/sulfurtransferase MoeZ.
  
 0.631
drrA3
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
  
  0.625
sugC3
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
    
0.618
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
 
   0.607
spoVK
Stage V sporulation protein K.
   
 0.605
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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