Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AXFE_18580 | AXFE_18590 | AXFE_18580 | AXFE_18590 | Hypothetical protein. | Hypothetical protein. | 0.474 |
AXFE_18580 | AXFE_18600 | AXFE_18580 | AXFE_18600 | Hypothetical protein. | Hypothetical protein. | 0.414 |
AXFE_18590 | AXFE_18580 | AXFE_18590 | AXFE_18580 | Hypothetical protein. | Hypothetical protein. | 0.474 |
AXFE_18590 | AXFE_18600 | AXFE_18590 | AXFE_18600 | Hypothetical protein. | Hypothetical protein. | 0.992 |
AXFE_18590 | AXFE_18610 | AXFE_18590 | AXFE_18610 | Hypothetical protein. | Hypothetical protein. | 0.981 |
AXFE_18590 | AXFE_34730 | AXFE_18590 | AXFE_34730 | Hypothetical protein. | AP-4-A phosphorylase. | 0.597 |
AXFE_18590 | gltB2 | AXFE_18590 | AXFE_29190 | Hypothetical protein. | Glutamate synthase [NADPH] large chain. | 0.538 |
AXFE_18590 | guaA | AXFE_18590 | AXFE_28990 | Hypothetical protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.412 |
AXFE_18590 | rhlE | AXFE_18590 | AXFE_19040 | Hypothetical protein. | ATP-dependent RNA helicase RhlE. | 0.465 |
AXFE_18590 | uvrD2 | AXFE_18590 | AXFE_21400 | Hypothetical protein. | ATP-dependent DNA helicase UvrD2. | 0.562 |
AXFE_18600 | AXFE_18580 | AXFE_18600 | AXFE_18580 | Hypothetical protein. | Hypothetical protein. | 0.414 |
AXFE_18600 | AXFE_18590 | AXFE_18600 | AXFE_18590 | Hypothetical protein. | Hypothetical protein. | 0.992 |
AXFE_18600 | AXFE_18610 | AXFE_18600 | AXFE_18610 | Hypothetical protein. | Hypothetical protein. | 0.981 |
AXFE_18600 | AXFE_34730 | AXFE_18600 | AXFE_34730 | Hypothetical protein. | AP-4-A phosphorylase. | 0.597 |
AXFE_18600 | gltB2 | AXFE_18600 | AXFE_29190 | Hypothetical protein. | Glutamate synthase [NADPH] large chain. | 0.538 |
AXFE_18600 | guaA | AXFE_18600 | AXFE_28990 | Hypothetical protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.412 |
AXFE_18600 | rhlE | AXFE_18600 | AXFE_19040 | Hypothetical protein. | ATP-dependent RNA helicase RhlE. | 0.455 |
AXFE_18600 | uvrD2 | AXFE_18600 | AXFE_21400 | Hypothetical protein. | ATP-dependent DNA helicase UvrD2. | 0.562 |
AXFE_18610 | AXFE_18590 | AXFE_18610 | AXFE_18590 | Hypothetical protein. | Hypothetical protein. | 0.981 |
AXFE_18610 | AXFE_18600 | AXFE_18610 | AXFE_18600 | Hypothetical protein. | Hypothetical protein. | 0.981 |
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