STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tcrA2Transcriptional regulatory protein TcrA. (223 aa)    
Predicted Functional Partners:
tcrY3
Putative sensor histidine kinase TcrY.
  0.976
senX3
Signal-transduction histidine kinase senX3.
 0.924
kinB
Alginate biosynthesis sensor protein KinB.
 
 0.920
tcrY2
Putative sensor histidine kinase TcrY.
 
 0.918
arlS1
Signal transduction histidine-protein kinase ArlS.
 
 0.914
tcrY1
Putative sensor histidine kinase TcrY.
 0.913
tcrY4
Putative sensor histidine kinase TcrY.
 0.913
mprB
Signal transduction histidine-protein kinase/phosphatase MprB.
  
 0.912
cusS
Sensor kinase CusS.
  0.905
arlS2
Signal transduction histidine-protein kinase ArlS.
  0.891
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.