STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXFE_21110Glycogen synthase. (447 aa)    
Predicted Functional Partners:
ubiE4
Demethylmenaquinone methyltransferase.
 
     0.960
AXFE_21170
Hypothetical protein.
 
  
  0.858
AXFE_21180
Hypothetical protein.
  
    0.778
mntH2
Divalent metal cation transporter MntH.
       0.773
AXFE_34280
Putative glycosyl hydrolase.
    
 0.771
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.723
hddC2
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
 
 0.720
uvrD2
ATP-dependent DNA helicase UvrD2.
    
 
 0.713
malP
Maltodextrin phosphorylase.
  
 0.519
AXFE_29540
Hypothetical protein.
 
     0.496
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.