STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arlS2Signal transduction histidine-protein kinase ArlS. (454 aa)    
Predicted Functional Partners:
tcrA3
Transcriptional regulatory protein TcrA.
  0.974
cph22
Phytochrome-like protein cph2.
  
 0.924
mprA2
Response regulator MprA.
  0.891
tcrA2
Transcriptional regulatory protein TcrA.
  0.891
regX31
Sensory transduction protein regX3.
  0.890
tcrA1
Transcriptional regulatory protein TcrA.
  0.890
tcrX1
Putative transcriptional regulatory protein TcrX.
  0.890
czcR
Transcriptional activator protein CzcR.
  0.890
tcrX2
Putative transcriptional regulatory protein TcrX.
  0.890
yycF
Transcriptional regulatory protein YycF.
  0.889
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.