STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livH2High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family. (292 aa)    
Predicted Functional Partners:
AXFE_22790
Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
lptB2
Lipopolysaccharide export system ATP-binding protein LptB.
 
 
 0.994
livF2
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
 
 
 0.992
livJ
Leu/Ile/Val/Thr-binding protein precursor.
 
 
 0.991
lptB1
Lipopolysaccharide export system ATP-binding protein LptB.
 
 
 0.973
lptB3
Lipopolysaccharide export system ATP-binding protein LptB.
 
 
 0.973
AXFE_22940
Receptor family ligand binding region.
 
 
 0.968
livF3
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
 
 
 0.963
AXFE_12900
Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.
 
0.962
livF1
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
 
 
 0.962
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.