STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malL2Oligo-1,6-glucosidase 1. (579 aa)    
Predicted Functional Partners:
bglF
PTS system beta-glucoside-specific EIIBCA component.
  
 
 0.972
mak
Maltokinase.
 0.961
glgX
Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.893
AXFE_34280
Putative glycosyl hydrolase.
  
 
 0.835
treS
Trehalose synthase/amylase TreS.
 
  
 
0.821
malP
Maltodextrin phosphorylase.
  
 0.818
rafA
Alpha-galactosidase.
  
 
 0.803
ydjH
Putative sugar kinase YdjH.
 
  
 0.792
hddC2
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
    
 0.788
otsB
Trehalose-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
 
 0.776
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.