STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppC1Dipeptide transport system permease protein DppC. (384 aa)    
Predicted Functional Partners:
oppF1
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
 0.997
oppD1
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
 0.997
oppD2
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
 0.990
oppF2
Oligopeptide transport ATP-binding protein OppF.
 
 0.986
dppB1
Dipeptide transport system permease protein DppB.
 
 0.980
gsiA2
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
 0.978
gsiA1
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
 0.976
gsiA3
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
 0.973
nikA
Nickel-binding periplasmic protein precursor.
 
  0.941
nikB
Nickel transport system permease protein NikB.
 
 0.917
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.