STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecsA1ABC-type transporter ATP-binding protein EcsA. (356 aa)    
Predicted Functional Partners:
AXFE_26030
ABC-2 family transporter protein.
  
 0.973
sugC3
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
     
0.893
livF3
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
 
    
0.866
fliM
Flagellar motor switch protein FliM.
       0.551
fliN
Flagellar motor switch protein FliN.
       0.551
sugC1
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
     
0.530
sugC2
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
     
0.474
AXFE_13010
Putative multidrug export ATP-binding/permease protein.
  
     0.471
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.433
macB1
Macrolide export ATP-binding/permease protein MacB.
 
    
0.401
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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