STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aiiAN-acyl homoserine lactonase. (274 aa)    
Predicted Functional Partners:
pah
Proclavaminate amidinohydrolase; Belongs to the arginase family.
       0.773
acpS
Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
    
  0.584
dppB2
Dipeptide transport system permease protein DppB.
       0.523
ddpC1
Putative D,D-dipeptide transport system permease protein DdpC.
       0.523
gsiA1
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
       0.523
AXFE_19190
Major facilitator superfamily protein.
  
     0.491
ddpA2
Putative D,D-dipeptide-binding periplasmic protein DdpA precursor.
       0.477
kipA
KipI antagonist.
       0.432
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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