STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsiA2Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. (679 aa)    
Predicted Functional Partners:
oppC
Oligopeptide transport system permease protein OppC.
 
 0.999
ddpC1
Putative D,D-dipeptide transport system permease protein DdpC.
 
 0.987
ddpC2
Putative D,D-dipeptide transport system permease protein DdpC.
 
 0.986
dppC2
Dipeptide transport system permease protein DppC.
 
 0.984
dppC1
Dipeptide transport system permease protein DppC.
 
 0.978
dppB3
Dipeptide transport system permease protein DppB.
 
 0.942
dppB2
Dipeptide transport system permease protein DppB.
 
 0.897
gsiC
Glutathione transport system permease protein GsiC.
 
 0.892
nikB
Nickel transport system permease protein NikB.
 
 0.848
dppB1
Dipeptide transport system permease protein DppB.
 
 0.827
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.