STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadA3Putative acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (289 aa)    
Predicted Functional Partners:
AXFE_13690
Hypothetical protein.
  
 0.931
fadB21
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.900
fadB22
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.882
acdA3
acyl-CoA dehydrogenase.
   
  0.827
fadA4
3-ketoacyl-CoA thiolase.
     0.825
cfiB2
2-oxoglutarate carboxylase small subunit.
  
 
 0.806
pcaF2
beta-ketoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 
0.800
AXFE_30700
Indolepyruvate ferredoxin oxidoreductase.
    
 0.795
bauC
Putative 3-oxopropanoate dehydrogenase.
   
 
  0.751
echA81
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.734
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.