STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXFE_34810Anion-transporting ATPase. (382 aa)    
Predicted Functional Partners:
AXFE_34800
Anion-transporting ATPase.
 
 
   0.993
arsA1
Arsenical pump-driving ATPase.
 
 
   0.964
AXFE_34790
Hypothetical protein.
       0.760
hisK
Histidinol-phosphatase; Belongs to the PHP hydrolase family. HisK subfamily.
       0.753
pdtaS
Putative sensor histidine kinase pdtaS.
       0.622
AXFE_19470
Polyketide cyclase / dehydrase and lipid transport.
 
     0.614
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). Belongs to the OMP decarboxylase family. Type 1 subfamily.
    
   0.579
AXFE_20140
Hypothetical protein.
  
     0.560
AXFE_22590
Putative diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family.
  
     0.512
addB
ATP-dependent helicase/deoxyribonuclease subunit B.
  
     0.494
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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