STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423925_00793Unannotated protein. (579 aa)    
Predicted Functional Partners:
GCA_000423925_01477
Unannotated protein.
  
 
 0.942
GCA_000423925_00902
Unannotated protein.
 
 0.875
GCA_000423925_02810
Unannotated protein.
 
  
  0.858
GCA_000423925_01476
Unannotated protein.
 
 
 0.848
GCA_000423925_00799
Unannotated protein.
  
 0.840
GCA_000423925_00026
Unannotated protein.
  
 
  0.830
GCA_000423925_02779
Unannotated protein.
 
  
  0.828
GCA_000423925_02824
Unannotated protein.
 
 0.823
GCA_000423925_02585
Unannotated protein.
 
 0.818
GCA_000423925_03762
Unannotated protein.
  
 0.818
Your Current Organism:
Butyrivibrio sp. VCD2006
NCBI taxonomy Id: 1280664
Other names: B. sp. VCD2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.