STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420865_00212Unannotated protein. (565 aa)    
Predicted Functional Partners:
GCA_000420865_00304
Unannotated protein.
  
  
 0.960
GCA_000420865_02295
Unannotated protein.
 
  
 0.832
GCA_000420865_02159
Unannotated protein.
    
 0.825
GCA_000420865_02025
Unannotated protein.
  
  
 0.816
GCA_000420865_02599
Unannotated protein.
    
 0.771
GCA_000420865_00303
Unannotated protein.
  
  
 0.750
GCA_000420865_01500
Unannotated protein.
  
  
 0.730
GCA_000420865_00190
Unannotated protein.
  
 
 0.726
GCA_000420865_02024
Unannotated protein.
  
  
 0.726
GCA_000420865_00300
Unannotated protein.
  
    0.705
Your Current Organism:
Butyrivibrio sp. XPD2006
NCBI taxonomy Id: 1280668
Other names: B. sp. XPD2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.