STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420865_01387Unannotated protein. (464 aa)    
Predicted Functional Partners:
GCA_000420865_01388
Unannotated protein.
  
    0.776
GCA_000420865_01389
Unannotated protein.
       0.689
GCA_000420865_03384
Unannotated protein.
  
     0.628
GCA_000420865_00404
Unannotated protein.
   
 
  0.599
GCA_000420865_00050
Unannotated protein.
  
     0.579
GCA_000420865_02688
Unannotated protein.
  
     0.542
GCA_000420865_01386
Unannotated protein.
       0.522
GCA_000420865_01390
Unannotated protein.
       0.513
GCA_000420865_02519
Unannotated protein.
  
   0.495
GCA_000420865_01018
Unannotated protein.
   
    0.457
Your Current Organism:
Butyrivibrio sp. XPD2006
NCBI taxonomy Id: 1280668
Other names: B. sp. XPD2006
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.