STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420945_01995Unannotated protein. (490 aa)    
Predicted Functional Partners:
GCA_000420945_01996
Unannotated protein.
 
     0.921
GCA_000420945_02000
Unannotated protein.
 
     0.890
GCA_000420945_02004
Unannotated protein.
 
     0.883
GCA_000420945_02005
Unannotated protein.
 
     0.882
GCA_000420945_02003
Unannotated protein.
 
     0.880
GCA_000420945_01091
Unannotated protein.
  
 0.848
GCA_000420945_02109
Unannotated protein.
  
 0.848
GCA_000420945_02007
Unannotated protein.
 
   
 0.846
GCA_000420945_02002
Unannotated protein.
 
     0.834
GCA_000420945_02426
Unannotated protein.
 
     0.787
Your Current Organism:
Butyrivibrio sp. VCB2006
NCBI taxonomy Id: 1280679
Other names: B. sp. VCB2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.