STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000424385_00583Unannotated protein. (579 aa)    
Predicted Functional Partners:
GCA_000424385_00582
Unannotated protein.
 
  
 
0.891
GCA_000424385_00585
Unannotated protein.
 
     0.811
GCA_000424385_00584
Unannotated protein.
       0.788
GCA_000424385_00761
Unannotated protein.
  
 0.732
GCA_000424385_03452
Unannotated protein.
   
 0.680
GCA_000424385_02037
Unannotated protein.
   
0.660
GCA_000424385_00862
Unannotated protein.
  
 
  0.600
GCA_000424385_01738
Unannotated protein.
    
  0.587
GCA_000424385_00550
Unannotated protein.
 
 
 
0.581
GCA_000424385_00551
Unannotated protein.
 
 
 
0.579
Your Current Organism:
Butyrivibrio sp. LC3010
NCBI taxonomy Id: 1280680
Other names: B. sp. LC3010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.