STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000424385_03230Unannotated protein. (287 aa)    
Predicted Functional Partners:
GCA_000424385_03232
Unannotated protein.
 0.999
GCA_000424385_00951
Unannotated protein.
 0.988
GCA_000424385_01212
Unannotated protein.
 
 
 0.977
GCA_000424385_03231
Unannotated protein.
 
  
0.954
GCA_000424385_01295
Unannotated protein.
  
 0.944
GCA_000424385_01296
Unannotated protein.
 
 0.943
GCA_000424385_02170
Unannotated protein.
 
  
 
0.848
GCA_000424385_02273
Unannotated protein.
 
 
 0.837
GCA_000424385_01294
Unannotated protein.
 
  
0.829
GCA_000424385_02248
Unannotated protein.
 
  
 
0.826
Your Current Organism:
Butyrivibrio sp. LC3010
NCBI taxonomy Id: 1280680
Other names: B. sp. LC3010
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.