STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000424505_03293Unannotated protein. (107 aa)    
Predicted Functional Partners:
GCA_000424505_03294
Unannotated protein.
       0.718
GCA_000424505_03296
Unannotated protein.
 
     0.613
GCA_000424505_02483
Unannotated protein.
 
     0.564
GCA_000424505_03295
Unannotated protein.
       0.552
GCA_000424505_03292
Unannotated protein.
     
 0.510
GCA_000424505_01165
Unannotated protein.
  
     0.495
GCA_000424505_00448
Unannotated protein.
  
 
 0.486
GCA_000424505_02319
Unannotated protein.
  
 
 0.486
GCA_000424505_00303
Unannotated protein.
   
    0.459
GCA_000424505_00904
Unannotated protein.
  
     0.449
Your Current Organism:
Butyrivibrio sp. XBB1001
NCBI taxonomy Id: 1280682
Other names: B. sp. XBB1001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.