STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000424325_04701Unannotated protein. (447 aa)    
Predicted Functional Partners:
GCA_000424325_04700
Unannotated protein.
       0.789
ADH76_32785
Unannotated protein.
 
  
 0.630
GCA_000424325_04703
Unannotated protein.
  
    0.558
ADH76_32795
Unannotated protein.
 
  
 0.554
GCA_000424325_04702
Unannotated protein.
       0.512
ADH76_18795
Unannotated protein.
  
  
 0.488
GCA_000424325_04704
Unannotated protein.
       0.483
ADH76_32775
Unannotated protein.
 
    0.422
GCA_000424325_03724
Unannotated protein.
 
  
 0.405
Your Current Organism:
Clostridium clostridioforme
NCBI taxonomy Id: 1280695
Other names: Clostridium clostridioforme AGR2157, [. clostridioforme AGR2157, [Clostridium] clostridioforme AGR2157
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.