STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316V8X6RRM domain-containing protein. (341 aa)    
Predicted Functional Partners:
A0A316VKD5
DUF663-domain-containing protein.
   
 
 0.978
A0A316VDR0
18S rRNA biogenesis protein.
   
 
 0.961
A0A316VIR9
WD40 repeat-like protein.
   
   0.952
A0A316V6C5
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.945
A0A316V4W0
Uncharacterized protein.
   
 
 0.943
A0A316VER4
DRIM domain-containing protein.
   
 
 0.937
A0A316V3S1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.933
A0A316VE75
BP28CT domain-containing protein.
   
   0.930
A0A316VMI6
NUC153 domain-containing protein.
   
 
 0.881
A0A316VK02
Sas10 domain-containing protein.
   
 
 0.876
Your Current Organism:
Meira miltonrushii
NCBI taxonomy Id: 1280837
Other names: ATCC MYA-4883, CBS 12591, M. miltonrushii, MCA 3882, Meira miltonrushii Rush & Aime 2012, Meira sp. JLH-2012, NRRL Y-48820
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