STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316VGA2ANK_REP_REGION domain-containing protein. (1440 aa)    
Predicted Functional Partners:
A0A316VK05
UFD1-domain-containing protein.
    
 
 0.879
A0A316VNR9
PFU-domain-containing protein.
    
   0.877
A0A316V0W9
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 
 0.831
A0A316V6R6
ATPase.
    
 0.772
A0A316VL23
Valosin-containing protein.
    
 0.772
A0A316VI93
WD40 repeat-like protein.
    
   0.741
A0A316VK10
E3 ubiquitin-protein ligase.
    
 
 0.685
A0A316VEB2
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 0.578
A0A316VG07
AAA-domain-containing protein; Belongs to the AAA ATPase family.
    
 0.571
A0A316VR94
Uncharacterized protein.
    
   0.549
Your Current Organism:
Meira miltonrushii
NCBI taxonomy Id: 1280837
Other names: ATCC MYA-4883, CBS 12591, M. miltonrushii, MCA 3882, Meira miltonrushii Rush & Aime 2012, Meira sp. JLH-2012, NRRL Y-48820
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