STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316VJY9Abhydrolase_2 domain-containing protein. (282 aa)    
Predicted Functional Partners:
A0A316VIY4
Alpha/beta-hydrolase.
     
 0.635
A0A316VEN5
HIT-type domain-containing protein.
    
   0.574
A0A316V5L7
WD40 repeat-like protein.
    
 
 0.572
A0A316V1N8
Alpha/beta-hydrolase.
     
 0.562
A0A316V5L5
Alpha/beta-hydrolase.
     
 0.562
A0A316VA95
Alpha/beta hydrolase.
     
 0.562
A0A316VEQ6
PLC-like phosphodiesterase.
     
 0.522
A0A316VHV4
Histone chaperone ASF1.
    
 
 0.522
A0A316VJN1
Patatin-domain-containing protein.
    
 0.486
A0A316VKU1
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 
 0.485
Your Current Organism:
Meira miltonrushii
NCBI taxonomy Id: 1280837
Other names: ATCC MYA-4883, CBS 12591, M. miltonrushii, MCA 3882, Meira miltonrushii Rush & Aime 2012, Meira sp. JLH-2012, NRRL Y-48820
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.