STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HY29_06560Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (57 aa)    
Predicted Functional Partners:
HY29_14860
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0337 (CsbD) family.
  
    0.813
HY29_12365
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.769
HY29_14290
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.632
HY29_10035
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.621
HY29_06565
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    
0.523
HY29_06555
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.522
HY29_03300
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.511
Your Current Organism:
Hyphomonas beringensis
NCBI taxonomy Id: 1280946
Other names: H. beringensis, Hyphomonas beringensis Li et al. 2015, Hyphomonas sp. 25B14_1, Hyphomonas sp. MCCC 1A07321, LMG 27914, LMG:27914, MCCC 1A07321, strain 25B14_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.