STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HJA_00665COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins. (363 aa)    
Predicted Functional Partners:
HJA_00650
Fumarylacetoacetate hydrolase family protein; COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
 
  
 0.965
HJA_00625
COG1448 Aspartate/tyrosine/aromatic aminotransferase.
  
 
 0.940
HJA_00655
Glyoxalase family protein; COG0346 Lactoylglutathione lyase and related lyases.
 
  
  0.934
phhA
COG3186 Phenylalanine-4-hydroxylase.
 
  
 0.905
HJA_12514
Maleylacetoacetate isomerase; COG0625 Glutathione S-transferase.
 
  
 0.878
HJA_02395
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.872
HJA_05102
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.872
HJA_07262
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
   
 
 0.843
phhB
COG2154 Pterin-4a-carbinolamine dehydratase.
  
  
 0.831
HJA_02410
Putative D-alanine aminotransferase; COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase.
   
 
  0.820
Your Current Organism:
Hyphomonas jannaschiana
NCBI taxonomy Id: 1280952
Other names: H. jannaschiana VP2, Hyphomonas jannaschiana VP2
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