STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HJA_14784COG1960 Acyl-CoA dehydrogenases. (363 aa)    
Predicted Functional Partners:
HJA_14789
COG1960 Acyl-CoA dehydrogenases.
     0.948
HJA_10600
enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.934
HJA_06457
COG1960 Acyl-CoA dehydrogenases.
 
     0.929
HJA_05977
COG1250 3-hydroxyacyl-CoA dehydrogenase.
 
 0.899
HJA_00735
COG1960 Acyl-CoA dehydrogenases.
 
     0.833
HJA_00195
acetyl-CoA acyltransferase/thiolase family protein; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.708
HJA_01090
COG1024 Enoyl-CoA hydratase/carnithine racemase.
   
  0.685
HJA_11290
COG1024 Enoyl-CoA hydratase/carnithine racemase.
   
  0.680
HJA_00955
enoyl-CoA hydratase/isomerase family protein; COG1024 Enoyl-CoA hydratase/carnithine racemase.
   
  0.670
HJA_01610
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.670
Your Current Organism:
Hyphomonas jannaschiana
NCBI taxonomy Id: 1280952
Other names: H. jannaschiana VP2, Hyphomonas jannaschiana VP2
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