STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOC_09749COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits. (1152 aa)    
Predicted Functional Partners:
HOC_18124
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
  
 0.999
HOC_18129
COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
  
 0.998
sdhA
COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 0.994
HOC_18119
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 0.969
HOC_01390
COG0281 Malic enzyme.
    
 0.953
HOC_05618
COG0067 Glutamate synthase domain 1.
    
 0.941
cysN
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
    
 0.932
HOC_08052
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.930
HOC_09954
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.930
HOC_12613
Pyruvate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.929
Your Current Organism:
Hyphomonas oceanitis
NCBI taxonomy Id: 1280953
Other names: H. oceanitis SCH89, Hyphomonas oceanitis SCH89
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.