STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOC_19381Hypothetical protein. (95 aa)    
Predicted Functional Partners:
HOC_19386
Autoinducer synthesis protein; COG3916 N-acyl-L-homoserine lactone synthetase.
       0.774
HOC_19391
Transcriptional regulator; COG2771 DNA-binding HTH domain-containing proteins.
       0.565
HOC_15542
Short-chain dehydrogenase/reductase SDR; COG3321 Polyketide synthase modules and related proteins.
  
  
 0.417
HOC_03663
FAD-binding oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.
   
  0.406
HOC_10724
Oxidoreductase, FAD-binding protein; COG0277 FAD/FMN-containing dehydrogenases.
   
  0.406
HOC_15777
FAD-dependent oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.
   
  0.406
Your Current Organism:
Hyphomonas oceanitis
NCBI taxonomy Id: 1280953
Other names: H. oceanitis SCH89, Hyphomonas oceanitis SCH89
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.