STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPO_15628CAIB/BAIF family protein; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase. (90 aa)    
Predicted Functional Partners:
HPO_11099
Hypothetical protein.
  
     0.751
HPO_11079
UbiE/COQ5 family methyltransferase; COG0500 SAM-dependent methyltransferases.
  
     0.747
HPO_11134
Hypothetical protein.
  
     0.742
HPO_02939
MmgE/PrpD family protein; COG2079 Uncharacterized protein involved in propionate catabolism; overlaps another CDS with the same product name.
  
 
  0.736
HPO_11139
Putative lipoprotein.
  
     0.717
HPO_02924
Hypothetical protein.
  
     0.711
HPO_11119
COG0477 Permeases of the major facilitator superfamily.
  
     0.707
HPO_02964
Putative oxidoreductase, FAD-binding protein; COG0277 FAD/FMN-containing dehydrogenases.
  
    0.699
HPO_02989
Carbon-nitrogen family hydrolase; COG0388 Predicted amidohydrolase.
  
    0.688
HPO_02994
Polysaccharide deacetylase family protein; COG0726 Predicted xylanase/chitin deacetylase; overlaps another CDS with the same product name.
  
     0.684
Your Current Organism:
Hyphomonas polymorpha
NCBI taxonomy Id: 1280954
Other names: H. polymorpha PS728, Hyphomonas polymorpha PS728
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