Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
HPO_02924 | HPO_02939 | Hypothetical protein. | MmgE/PrpD family protein; COG2079 Uncharacterized protein involved in propionate catabolism; overlaps another CDS with the same product name. | 0.572 |
HPO_02924 | HPO_02964 | Hypothetical protein. | Putative oxidoreductase, FAD-binding protein; COG0277 FAD/FMN-containing dehydrogenases. | 0.713 |
HPO_02924 | HPO_02989 | Hypothetical protein. | Carbon-nitrogen family hydrolase; COG0388 Predicted amidohydrolase. | 0.772 |
HPO_02924 | HPO_02994 | Hypothetical protein. | Polysaccharide deacetylase family protein; COG0726 Predicted xylanase/chitin deacetylase; overlaps another CDS with the same product name. | 0.725 |
HPO_02924 | HPO_11079 | Hypothetical protein. | UbiE/COQ5 family methyltransferase; COG0500 SAM-dependent methyltransferases. | 0.756 |
HPO_02924 | HPO_11099 | Hypothetical protein. | Hypothetical protein. | 0.704 |
HPO_02924 | HPO_11119 | Hypothetical protein. | COG0477 Permeases of the major facilitator superfamily. | 0.692 |
HPO_02924 | HPO_11139 | Hypothetical protein. | Putative lipoprotein. | 0.774 |
HPO_02924 | HPO_15628 | Hypothetical protein. | CAIB/BAIF family protein; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase. | 0.711 |
HPO_02939 | HPO_02924 | MmgE/PrpD family protein; COG2079 Uncharacterized protein involved in propionate catabolism; overlaps another CDS with the same product name. | Hypothetical protein. | 0.572 |
HPO_02939 | HPO_02964 | MmgE/PrpD family protein; COG2079 Uncharacterized protein involved in propionate catabolism; overlaps another CDS with the same product name. | Putative oxidoreductase, FAD-binding protein; COG0277 FAD/FMN-containing dehydrogenases. | 0.712 |
HPO_02939 | HPO_02989 | MmgE/PrpD family protein; COG2079 Uncharacterized protein involved in propionate catabolism; overlaps another CDS with the same product name. | Carbon-nitrogen family hydrolase; COG0388 Predicted amidohydrolase. | 0.457 |
HPO_02939 | HPO_02994 | MmgE/PrpD family protein; COG2079 Uncharacterized protein involved in propionate catabolism; overlaps another CDS with the same product name. | Polysaccharide deacetylase family protein; COG0726 Predicted xylanase/chitin deacetylase; overlaps another CDS with the same product name. | 0.742 |
HPO_02939 | HPO_11079 | MmgE/PrpD family protein; COG2079 Uncharacterized protein involved in propionate catabolism; overlaps another CDS with the same product name. | UbiE/COQ5 family methyltransferase; COG0500 SAM-dependent methyltransferases. | 0.698 |
HPO_02939 | HPO_11099 | MmgE/PrpD family protein; COG2079 Uncharacterized protein involved in propionate catabolism; overlaps another CDS with the same product name. | Hypothetical protein. | 0.588 |
HPO_02939 | HPO_11119 | MmgE/PrpD family protein; COG2079 Uncharacterized protein involved in propionate catabolism; overlaps another CDS with the same product name. | COG0477 Permeases of the major facilitator superfamily. | 0.639 |
HPO_02939 | HPO_11134 | MmgE/PrpD family protein; COG2079 Uncharacterized protein involved in propionate catabolism; overlaps another CDS with the same product name. | Hypothetical protein. | 0.661 |
HPO_02939 | HPO_11139 | MmgE/PrpD family protein; COG2079 Uncharacterized protein involved in propionate catabolism; overlaps another CDS with the same product name. | Putative lipoprotein. | 0.486 |
HPO_02939 | HPO_15628 | MmgE/PrpD family protein; COG2079 Uncharacterized protein involved in propionate catabolism; overlaps another CDS with the same product name. | CAIB/BAIF family protein; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase. | 0.736 |
HPO_02964 | HPO_02924 | Putative oxidoreductase, FAD-binding protein; COG0277 FAD/FMN-containing dehydrogenases. | Hypothetical protein. | 0.713 |
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