STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESQ87962.1Conjugal transfer protein TraC; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (916 aa)    
Predicted Functional Partners:
ESQ87183.1
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.958
ESQ87959.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.953
ESQ87965.1
Peptidase S26; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase S26 family.
 
   
 0.911
ESQ87967.1
Conjugal transfer protein TraU; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.908
ESQ87969.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.908
ESQ87968.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.906
ESQ87966.1
Conjugal transfer protein TraW; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.905
ESQ87187.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.896
ESQ87972.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.888
ESQ87970.1
Conjugal transfer protein TraF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.884
Your Current Organism:
Asticcacaulis sp. AC460
NCBI taxonomy Id: 1282360
Other names: A. sp. AC460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.