STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yycJMetallo-beta-lactamase hydrolase. (266 aa)    
Predicted Functional Partners:
yycI
Regulatory protein YycI.
  
  
 0.973
yycH
Two-component regulator YycH.
  
  
 0.964
walK
Multi-sensor signal transduction histidine kinase, WalK.
  
  
 0.891
walR
Transcriptional regulator WalR.
  
  
 0.880
AKC76215.1
Exonuclease.
     
 0.840
rlmH
rRNA large subunit methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.587
AKC75933.1
General stress protein.
   
    0.451
AKC75849.1
D-isomer specific 2-hydroxyacid dehydrogenase family protein.
   
    0.449
AKC75831.1
Fe-S oxidoreductase.
  
  
 0.428
lytH
N-acetylmuramoyl-L-alanine amidase family protein; Probably involved in cell-wall metabolism. Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family.
     
 0.409
Your Current Organism:
Staphylococcus haemolyticus
NCBI taxonomy Id: 1283
Other names: ATCC 29970, CCM 2737, CCUG 7323, CIP 81.56, DSM 20263, JCM 2416, LMG 13349, LMG:13349, NCTC 11042, NRRL B-14755, S. haemolyticus
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