STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKC74952.1Hypothetical protein. (234 aa)    
Predicted Functional Partners:
AKC74951.1
ABC superfamily ATP binding cassette transporter, ABC protein.
       0.872
AKC77003.1
Lantibiotic protection ABC transporter permease subunit.
  
 
 0.625
mepB
MATE family multidrug efflux pump protein.
       0.610
atpB_2
ATP synthase subunit beta, AtpB; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.501
atpA_2
ATP synthase subunit alpha, AtpA; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.489
AKC74954.1
Hypothetical protein.
       0.480
atpG
ATP synthase subunit gamma, AtpG; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.472
thrS_1
threonyl-tRNA synthetase 1; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
   
   0.456
atpE
ATP synthase epsilon chain, AtpE; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.426
msbA
Lipid A export ATP-binding/permease MsbA.
  
 0.411
Your Current Organism:
Staphylococcus haemolyticus
NCBI taxonomy Id: 1283
Other names: ATCC 29970, CCM 2737, CCUG 7323, CIP 81.56, DSM 20263, JCM 2416, LMG 13349, LMG:13349, NCTC 11042, NRRL B-14755, S. haemolyticus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.